Population Genetics
DnaSP http://www.ub.es/dnasp/
STRUCTURE http://pritch.bsd.uchicago.edu/structure.html
Phylogenetics
PAML http://abacus.gene.ucl.ac.uk/software/paml.html
Phylip http://evolution.genetics.washington.edu/phylip.html
MrBayes http://mrbayes.csit.fsu.edu/
Drosophila Genomics
FlyBase http://flybase.bio.indiana.edu/
12 Genomes Wiki http://rana.lbl.gov/drosophila/wiki/index.php/Main_Page
Droso. polymorphism genome project (DPGP) http://www.dpgp.org/
Tucson Drosophila Stockcenter http://stockcenter.arl.arizona.edu/
Computation and Statistics
R-project http://www.r-project.org/
BioPerl http://www.bioperl.org/wiki/Main_Page
Sequencing and Sequence Alignment
Cornell Sequencing Center http://cores.lifesciences.cornell.edu/brcinfo/?f=1
Sequencher
phred/phrap/consed http://www.phrap.org/phredphrapconsed.html
CLUSTAL http://www.ebi.ac.uk/Tools/clustalw2/index.html
MUSCLE http://www.drive5.com/muscle/
Molecular Biology
Fisher Oligos https://www.fisheroligo.com/index.php?
Primer3 http://frodo.wi.mit.edu/
Lasergene- SeqBuilder Windows & Mac & Key server
Protein Bioinformatics
ExPASy - alignment, secondary structure, motifs, and more http://ca.expasy.org/tools/
SMART - domains http://smart.embl-heidelberg.de/
Structural biology
Protein Structure Data Bank (PDB) http://www.rcsb.org/pdb/home/home.do
PyMol -structure viewer http://pymol.sourceforge.net/
PolyPhen -mutational effects http://genetics.bwh.harvard.edu/pph/
Cornell
Life Sciences Core Labs Center http://cores.lifesciences.cornell.edu/brcinfo/
MBG Seminars http://www.mbg.cornell.edu/cals/mbg/about/seminars/index.cfm
Ecology and Evolutionary Biology Seminars http://www.eeb.cornell.edu/department/seminars.html
Dept. Biol. Stats and Comp Bio http://www.bscb.cornell.edu/
RefWorks https://www.refworks.com/Refworks/login.asp?WNCLang=false
DnaSP http://www.ub.es/dnasp/
STRUCTURE http://pritch.bsd.uchicago.edu/structure.html
Phylogenetics
PAML http://abacus.gene.ucl.ac.uk/software/paml.html
Phylip http://evolution.genetics.washington.edu/phylip.html
MrBayes http://mrbayes.csit.fsu.edu/
Drosophila Genomics
FlyBase http://flybase.bio.indiana.edu/
12 Genomes Wiki http://rana.lbl.gov/drosophila/wiki/index.php/Main_Page
Droso. polymorphism genome project (DPGP) http://www.dpgp.org/
Tucson Drosophila Stockcenter http://stockcenter.arl.arizona.edu/
Computation and Statistics
R-project http://www.r-project.org/
BioPerl http://www.bioperl.org/wiki/Main_Page
Sequencing and Sequence Alignment
Cornell Sequencing Center http://cores.lifesciences.cornell.edu/brcinfo/?f=1
Sequencher
phred/phrap/consed http://www.phrap.org/phredphrapconsed.html
CLUSTAL http://www.ebi.ac.uk/Tools/clustalw2/index.html
MUSCLE http://www.drive5.com/muscle/
Molecular Biology
Fisher Oligos https://www.fisheroligo.com/index.php?
Primer3 http://frodo.wi.mit.edu/
Lasergene- SeqBuilder Windows & Mac & Key server
Protein Bioinformatics
ExPASy - alignment, secondary structure, motifs, and more http://ca.expasy.org/tools/
SMART - domains http://smart.embl-heidelberg.de/
Structural biology
Protein Structure Data Bank (PDB) http://www.rcsb.org/pdb/home/home.do
PyMol -structure viewer http://pymol.sourceforge.net/
PolyPhen -mutational effects http://genetics.bwh.harvard.edu/pph/
Cornell
Life Sciences Core Labs Center http://cores.lifesciences.cornell.edu/brcinfo/
MBG Seminars http://www.mbg.cornell.edu/cals/mbg/about/seminars/index.cfm
Ecology and Evolutionary Biology Seminars http://www.eeb.cornell.edu/department/seminars.html
Dept. Biol. Stats and Comp Bio http://www.bscb.cornell.edu/
RefWorks https://www.refworks.com/Refworks/login.asp?WNCLang=false