Links to software developed by members of the Aquadro lab and collaborators:
Synonymous likelihood analysis presented in Nielsen et al 2007 (Mol. Biol. Evol. 24: 228-235)
http://www.evolutionarygenomics.dk/pgs/programs.html
GOF analysis associated with selective sweeps presented in Jensen et al 2005 (Genetics 170: 1401-1410)
http://yuseobkim.net/YuseobPrograms.html
E-mail Vanessa Bauer DuMont (vlb2@cornell.edu) to receive the program to perform the counting "per site" method of synonymous site evolution presented in Bauer DuMont et al 2004 (Genetics 167: 171-185)
Synonymous likelihood analysis presented in Nielsen et al 2007 (Mol. Biol. Evol. 24: 228-235)
http://www.evolutionarygenomics.dk/pgs/programs.html
GOF analysis associated with selective sweeps presented in Jensen et al 2005 (Genetics 170: 1401-1410)
http://yuseobkim.net/YuseobPrograms.html
E-mail Vanessa Bauer DuMont (vlb2@cornell.edu) to receive the program to perform the counting "per site" method of synonymous site evolution presented in Bauer DuMont et al 2004 (Genetics 167: 171-185)